Pompe Disease

Pompe Disease, also known as Glycogen Storage Disease Type II or acid maltase deficiency, is an autosomal recessive lysosomal storage disorder caused by mutations in the GAA gene that lead to absence or deficiency of the enzyme acid alpha-glucosidase.

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Pompe Disease, also known as Glycogen Storage Disease Type II or acid maltase deficiency, is an autosomal recessive lysosomal storage disorder caused by mutations in the GAA gene that lead to absence or deficiency of the enzyme acid alpha-glucosidase.

Pompe Disease is broadly classified into infantile-onset (with classic and non-classic types) and late-onset (with childhood, juvenile, and adult-onset types).

Genetic testing is a valuable complement to biochemical diagnostic testing. Knowledge of familial mutations facilitates carrier testing for relatives, which cannot be done reliably with biochemical testing. Also, some genotype-phenotype correlation has been observed for the more common mutations which may help classify disease type.

The Ambry Test is a full Gene Sequence Analysis that detects approximately 99% of GAA mutations.

Disease Name 
Pompe Disease
Disease Information 

Pompe Disease, also known as Glycogen Storage Disease Type II or acid maltase deficiency, is an autosomal recessive lysosomal storage disorder caused by mutations in the GAA gene that lead to absence or deficiency of the enzyme acid alpha-glucosidase. Glycogen breakdown in the lysosomes is impaired and its accumulation causes progressive damage in multiple tissues, especially cardiac and skeletal muscle. Pompe Disease occurs in all races has an overall estimated incidence of 1 in 40,000 births.1

Pompe Disease is broadly classified into infantile-onset (with classic and non-classic types) and late-onset (with childhood, juvenile, and adult-onset types). Classic infantile-onset disease may be seen in utero or within the first month of life, with symptoms including low muscle tone, weakness, poor feeding, cardiomyopathy, and respiratory distress. If untreated, cardiopulmonary insufficiency often leads to death in the first year. Late-onset disease presents from the first to the sixth decade of life with slowly progressive skeletal muscle weakness and without significant cardiac involvement. In these cases, respiratory muscle weakness is the leading cause of death. Age of onset and severity roughly correspond to residual enzyme level which is determined, in part, by the identity and combination of mutations present in the affected individual. Prompt diagnosis allows early referral for enzyme replacement therapy which can improve or stabilize symptoms and quality of life, especially in the infantile onset group.1

Genetic testing is a valuable complement to biochemical diagnostic testing. Knowledge of familial mutations facilitates carrier testing for relatives, which cannot be done reliably with biochemical testing. Also, some genotypephenotype correlation has been observed for the more common mutations which may help classify disease type.

Testing Benefits & Indication 

Genetic testing enables diagnostic confirmation and determination of carrier status in at-risk family members or reproductive partners of known carriers. The Ambry Test: Pompe Disease allows a non- or minimally invasive collection of saliva or blood, in contrast to biopsy for skin fibroblast culture. Tissue culture and enzyme turn-around-time may often extend beyond that of genetic testing.

Test Description 

The Ambry Test: Pompe Disease is a full gene sequence analysis performed by PCR-based double-stranded automated sequencing the sense and antisense directions for coding exons 2-20 of the GAA gene, plus at least 20 bases into the 5’ and 3’ ends of all the introns. Exon 18 deletion mutation detection is performed by PCR amplification of exons 17 and 19 along with flanking intronic sequences and size analysis via agarose gel electrophoresis. Specific mutation analysis for individual GAA mutations known to be in the family is also available.

Mutation Detection Rate 

Clinical and analytical sensitivities are both approximately 99%.

Specimen Requirements 

Blood: Collect 3-5 cc from adult or 2 cc minimum from child into EDTA purple-top tube (first choice) or ACD yellow-top tube (second choice). Store at room temperature or refrigerate. Ship at room temperature.
Blood Spot: Call for availability of testing on bloodspots.
Saliva: Collect 2 ml into Oragene™ DNA Self-Collection container. Store and ship at room temperature.
DNA: Send 20 μg in TE at 50-100 ng/μl. Store frozen and ship on ice or dry ice.
Prenatal: Prenatal testing is available. Please call an Ambry Genetic Counselor to discuss your case.

Billing Codes 
Test Code Technique CPT Codes
1740 GAA Gene Sequence Analysis 83891x1, 83894x19, 83898x18, 83904x36, 83909x36, 83912x1

 

Turnaround Time 
Technique Days
GAA Gene Sequence Analysis 10-21

 

Specialty 
Genes 
References 

1 Reviewed in Katzin LW, Amato AA. J Clin Neuromuscul Dis. 2008;9:421-431.